A scalable moment-closure approximation for large-scale biochemical reaction networks (2017) Kazeroonian A, Theis FJ, Hasenauer J Journal article FastER: A User-Friendly tool for ultrafast and robust cell segmentation in large-scale microscopy (2017) Hilsenbeck O, Schwarzfischer M, Loeffler D, Dimopoulos S, Hastreiter S, Marr C, Theis FJ, Schroeder T Journal article Parameter estimation for dynamical systems with discrete events and logical operations (2017) Froehlich F, Theis FJ, Raedler JO, Hasenauer J Journal article Fast, clash-free RNA conformational morphing using molecular junctions (2017) Héliou A, Budday D, Fonseca R, van den Bedem H Journal article, Letter PreMosa: extracting 2D surfaces from 3D microscopy mosaics (2017) Blasse C, Saalfeld S, Etournay R, Sagner A, Eaton S, Myers EW Journal article, Original article MEMO: Multi-experiment mixture model analysis of censored data (2016) Geissen EM, Hasenauer J, Heinrich S, Hauf S, Theis FJ, Radde NE Journal article Destiny: Diffusion maps for large-scale single-cell data in R (2016) Angerer P, Haghverdi L, Buettner M, Theis FJ, Marr C, Buettner F Journal article Data2Dynamics: A modeling environment tailored to parameter estimation in dynamical systems (2015) Raue A, Steiert B, Schelker M, Kreutz C, Maiwald T, Hass H, Vanlier J, et al. Journal article Diffusion maps for high-dimensional single-cell analysis of differentiation data (2015) Haghverdi L, Buettner F, Theis FJ Journal article Reconstructing gene regulatory dynamics from high-dimensional single-cell snapshot data (2015) Ocone A, Haghverdi L, Mueller NS, Theis FJ Journal article